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BLASTP

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AcronymDefinition
BLASTPBasic Local Alignment Search Tool Program


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Template validation studies shows that both the templates charybdotoxin and iberiotoxin shares 54% and 75% sequence identity respectively in both BLASTP and PDBSUM that indicates both the templates are suitable for comparative modeling of our target.
BONDplus also contains pre-computed BLASTP and RPS BLAST results allowing users to view enhanced search results for a protein of interest.
Sequences for all 32 genes (and their encoded proteins) are highly related to previously determined sequences (BLASTN identities 93%-98% and BLASTP identities 98% 100%) (online Table) and do not suggest the presence of human influenza A genes.
 
 
 
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