CODEHOPConsensus-Degenerate Hybrid Oligonucleotide Primers
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CODEHOP makes it possible to target conserved sequences within a pathogen family in order to identify both known and unknown variants of a disease pathogen.
CODEHOP (COnsensus-DE-generate hybrid oligonucleotide primer) PCR primer design.
Although the CODEHOP primers were elementary for rapid genotyping of the novel CVA6 strains, we identified more viruses with the designated CVA6-VP1 specific primers.