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NAMD

   Also found in: Wikipedia 0.01 sec.
AcronymDefinition
NAMDNational Alliance of Market Developers
NAMDNational Association of Market Developers (Plainfield, NJ)
NAMDNational Association of Membership Development
NAMDNot at My Desk (Internet slang)
NAMDNeutral/Alkaline Mine Drainage
NAMDNational Association of Marble Dealers


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Today, Sun announced the following benchmark results: NAMD: The Sun Blade 6048 chassis with 48 Sun Fire X6275 blade servers (768 cores) and QDR InfiniBand, delivered the best published result on the molecular modeling NAMD benchmark, with up to 95 percent better performance than double data rate (DDR) IB and a scalability efficiency of nearly 80 percent(2).
While custom in-house code will be written for these large data searches, TGen reports that benchmarks were run on the National Center for Biotechnology Information (NCBI) BLAST (Basic Local Alignment Search Tool), an algorithm for comparing primary biological sequence information, ClustalW, a general purpose multiple sequence alignment program for DNA or proteins, and NAMD, a parallel molecular dynamics code for large biomolecular systems.
The NAMD offers a case in point: It marketed 2002 as being its 50th annual celebration as a black group and used that to bargain with city leaders and the convention bureau in Washington, D.
 
 
 
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