Haplotype Total Control Case P frequency (%) frequency (%) frequency (%) GTGAA 51.93 50.85 53.57 -- ATGGA 14.38 16.30 11.86 0.04 ATAGG 8.28 9.88 6.59 0.04 GGAAA 8.26 7.82 8.46 0.67 GTAAG 7.29 6.40 8.20 0.47 ATGGG 3.17 3.09 3.20 0.84
GTAAA 3.08 2.27 4.05 0.22 GGGAA 1.24 1.50 0.94 0.28 ATAGA 1.10 0.88 1.31 0.55 Rare 1.27 1.01 1.82 0.30 Haplotype OR 95%CI GTGAA -- ATGGA 1.46 0.02-2.11 ATAGG 1.63 1.03-2.60 GGAAA 0.91 0.59-1.41 GTAAG 0.84 0.52-1.35 ATGGG 1.08 0.54-2.13
GTAAA 0.63 0.30-1.32 GGGAA 1.85 0.61-5.65 ATAGA 0.66 0.16-2.62 Rare 0.54 0.17-1.73 In the order of rs1042034, rs2163204, rs512535, rs676210, and rs679899.