HGAPHousing Grant Assistance Program
HGAPHorizontal Gap
References in periodicals archive ?
HGAP produces linear DNA sequences, so we identified circular, complete chromosome sequences on the basis of the existence of reads that bridged the 2 ends of the chromosome after 1 copy of the terminal repeat produced by the assembler was removed.
Long sequencing reads were obtained with the Pacific Biosciences RS II (Menlo Park, CA, USA) at >120 x coverage and assembled de novo into a single contig by using HGAP v3 and Quiver v1 (Pacific Biosciences).