List of variable sites observed in the hypervariable region
I (HVRI) of human mtDNA control region.
Specimens from the eight patients with positive adenovirus cultures were then submitted to the California Department of Public Health Viral and Rickettsial Disease Laboratory (VRDL) for HAdV detection and molecular typing by sequence analysis of the hypervariable region
of the HAdV hexon gene and the HAdV group-specific region of the fiber gene (3,4).
Sequence alignment and phylogenetic analysis based on direct sequencing of hypervariable region
of hexon gene grouped these sequences into two distinct groups, three FAdV isolates were clustered together belonging to fowl adenoviruses C species and serotype FAdV-4.
By sequencing the hypervariable region
of the bacterial 16S ribosomal RNA gene, the bacterial composition was determined.
I (HVR-I) was amplified and sequenced using the protocol outlined in Malhi et al.
Each of the HLA-DR molecules associated with RA has the same or very similar amino acid sequence in the third hypervariable region
of the [beta]-chain.
The assay utilizes well-defined antigens derived from HCV immunodominant proteins from the core region, the E2 hypervariable region
(HVR), the NS3 helicase regions and the NS4A, NS4B, and NS5A regions as described previously.
We amplified the hypervariable region
V3-V4 of the 16S rRNA (422 bp) using PCR primers (S-D-Bact-0341-b-S-17/SD-Bact-0785-a-A-21) (9), following a modified 16S MiSeq protocol and barcoded samples before sequencing on a MiSeq (Illumina, Victoria, British Columbia, Canada).
Susceptibility to RA is associated with the third hypervariable region
of DR[beta]1 allele, which is termed as the susceptibility epitope (SE).
It was also reported that specific amino acid changes in the hypervariable region
of the VP2 protein determine the cell culture adaptation and attenuation of IBD virus .
The "denoised" sequences were trimmed off the primer 357F and 519R, which results in sequences of the V3 hypervariable region
of 16S rRNA genes (minimum length: 100 bp, average length: 145 bp).
CRC tissues (n = 35) Polymorphisms Risk evaluation and the located in and prognosis corresponding hypervariable region
evaluation noncancerous tissues I (67.9%) more than that in II (32.1%) of D-loop.