MAGE-MLMicroArray and Gene Expression Markup Language
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Tox-MIAMExpress is an open-source project, consisting of a perl-CGI interface, MySQL database, and MAGE-ML export component implemented using MAGE Software ToolKit.
Users can also receive the data as a MAGE-ML download for easy export into any MAGE-standard supportive tool (MGED;
The international data-capture guideline, MIAME, and draft MIAME/Tox for toxicogenomics experiments, MAGE-ML data exchange format, is used to assemble and exchange high-quality data sets with the goal of creating a system of predictive toxicology.
2002) are formatted in an abridged version of MAGE-ML and loaded into a custom-designed Oracle database table with a version of the EBI ArrayExpress database installed.
In addition, the NIEHS NCT CEBS is taking steps to extend MAGE-ML to load toxicology and pathology data sets compatible with NTP and Xybion toxicology databases (Cedar Knolls, NJ; http://www.xybion.