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Motifs were searched in the first-cut regions, that is, regA and regD in sequences with base-to-loop mechanism and regC and regB in loop-to-base sequences.
The next analytical step concerned again regA and regC (further treated as single set and denoted as regAC), regB and regD (further denoted as regBD), and random sequences.
Thus, in the case of regAC analysis, we used regA of base-to-loop structures and regC of loop-to-base structures.
The editors' hard work of discovery is modestly buried among the technical information concerning sources and prior publications, for only there is it evident that in many instances H-B have located and transcribed the original will (OW) as distinct from an Office Copy (OffC) or a Register Copy (RegC) published by a previous editor.